Package index
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.count_alleles()
- Count derived or ancestral alleles for a given vcf position
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.split_geno()
- Split a genotype column from a vcf file
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.vcf_ncd1()
- Make input file for NCD1 from VCF
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.vcf_ncd2()
- Make input file for NCD2 from VCF
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ncd1()
- Calculate non-central statistic (NCD1)
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ncd1_input
- Input data to run ncd1 example
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ncd2()
- Calculate non-central statistic (NCD2)
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ncd2_input
- Input data to run ncd2 example
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parse_vcf()
- Parse vcf
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read_vcf()
- Read vcf
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vcf_obj
- An example VCF (variant call format) read into R